• Press Release

Resistance to Immunotherapy in Patients with Urothelial Bladder Cancer Is Traced to Specific Sets of Immune Cells

  • New York, NY
  • (April 09, 2021)

Sets of genes associated with resistance to immunotherapy in patients with metastatic urothelial cancer of the bladder have been identified and validated by researchers at Mount Sinai. In a study published in Clinical Cancer Research, the team uncovered gene signatures representing adaptive immunity and pro-tumorigenic inflammation that were responsible for sensitivity or resistance to immune checkpoint inhibitors, drugs that help the body’s immune system recognize and attack cancerous cells.

“These findings enabled us to identify potential biomarkers in patients who are less likely to respond favorably to immune checkpoint inhibitors, as well as new combination therapeutic approaches that might overcome such resistance in those patients,” says senior author Matthew Galsky, MD, Professor of Medicine (Hematology and Medical Oncology), Icahn School of Medicine at Mount Sinai.

Significantly, the findings demonstrated that the balance between adaptive immunity and pro-tumorigenic inflammation in individual tumor microenvironments—reflected by these two gene signatures—best predicted response or resistance to immune checkpoint blockade. The researchers then identified specific cells in the tumor microenvironment associated with resistance to immune checkpoint blockade, and potential targets for therapies designed to overcome resistance. 

For decades, standard treatment for metastatic urothelial cancer of the bladder has been platinum-based chemotherapy, though the landscape has changed dramatically in recent years with the advent of PD-1 and PD-L1 immune checkpoint inhibitors. This therapeutic breakthrough has had its limits, though: only 20 to 25 percent of patients with bladder cancer respond to treatment, which has set off an intense hunt by biomedical scientists for mechanisms of resistance.

“Using RNA sequencing data from two clinical trials, and single cell RNA sequencing data from a cohort of bladder tumors, we identified a subset of genes and immune cells associated with adaptive immunity and improved checkpoint inhibitor outcomes, and a subset associated with pro-tumorigenic inflammation and resistance to PD-1/PD-L1 blockade in patients with urothelial cancer,” Dr. Galsky says.

The research is among the first to use both bulk and single-cell RNA sequencing of human bladder tumors to study resistance to immunotherapy. Bulk sequencing examines the mix of genes expressed by every individual cell within a tumor, while single-cell sequencing—a technique increasingly important in cancer research—zeroes in on gene expression by each individual cell, which yields unprecedented knowledge of the complexity and heterogeneity of cells that comprise tumors.

Through this combination of RNA sequencing, researchers learned, for example, that the balance of adaptive immunity and pro-tumorigenic inflammation within the tumor microenvironment can determine PD-1/PD-L1 resistance in urothelial cancer. Adaptive immunity is the body’s ability to recognize and respond to specific foreign invaders, while pro-tumorigenic inflammation is a counterproductive response of the immune system that can ultimately fuel growth and progression of cancer.

“If the tumor microenvironment is weighted more toward adaptive immunity, there’s a better chance of positive outcomes from immunotherapy,” explains Dr. Galsky, who is Associate Director of Translational Research and Co-Director of the Bladder Cancer Center of Excellence at The Tisch Cancer Institute. “On the other hand, if the tumor microenvironment is leaning toward pro-tumorigenic inflammation, then PD-1/PD-L1 checkpoint inhibitors alone are unlikely to be successful, and new combination approaches may be needed.” Mount Sinai researchers coined the term “2IR Score” to measure that balance.

From its comprehensive RNA analysis, the team identified not just potential biomarkers to treatment resistance, but a specific subset of white blood cells known as myeloid phagocytic cells that are linked to pro-tumorigenic inflammation and, hence, resistance. As such, they serve as prospective targets for therapeutic approaches that combine immunotherapies like PD-1/PD-L1 blockade with drugs designed to overcome the resistance conferred by myeloid cells. Those novel combination strategies are now being incorporated into future clinical trials.

“Our research shows that a specific cellular state of myeloid cells underlying pro-tumorigenic inflammation account for resistance to immune checkpoint blockade in a very large percentage of patients with urothelial bladder cancer,” Dr. Galsky says. “This is an important finding which we believe can lead to a better focus and direction for developing effective combination therapies – and not just for bladder cancer, but other types of tumors, as well”.

The Mount Sinai-led study was a collaborative effort with Bristol-Myers Squibb and the University of Texas MD Anderson Cancer Center. Research reported in the Clinical Cancer Research publication was supported by the National Cancer Institute of the National Institutes of Health (NIH) under Award Number R01CA249175. The content is solely the responsibility of the authors and does not necessarily represent the official views of the NIH.


About the Mount Sinai Health System

Mount Sinai Health System is one of the largest academic medical systems in the New York metro area, with more than 43,000 employees working across eight hospitals, over 400 outpatient practices, nearly 300 labs, a school of nursing, and a leading school of medicine and graduate education. Mount Sinai advances health for all people, everywhere, by taking on the most complex health care challenges of our time — discovering and applying new scientific learning and knowledge; developing safer, more effective treatments; educating the next generation of medical leaders and innovators; and supporting local communities by delivering high-quality care to all who need it.

Through the integration of its hospitals, labs, and schools, Mount Sinai offers comprehensive health care solutions from birth through geriatrics, leveraging innovative approaches such as artificial intelligence and informatics while keeping patients’ medical and emotional needs at the center of all treatment. The Health System includes approximately 7,300 primary and specialty care physicians; 13 joint-venture outpatient surgery centers throughout the five boroughs of New York City, Westchester, Long Island, and Florida; and more than 30 affiliated community health centers. We are consistently ranked by U.S. News & World Report's Best Hospitals, receiving high "Honor Roll" status, and are highly ranked: No. 1 in Geriatrics and top 20 in Cardiology/Heart Surgery, Diabetes/Endocrinology, Gastroenterology/GI Surgery, Neurology/Neurosurgery, Orthopedics, Pulmonology/Lung Surgery, Rehabilitation, and Urology. New York Eye and Ear Infirmary of Mount Sinai is ranked No. 12 in Ophthalmology. U.S. News & World Report’s “Best Children’s Hospitals” ranks Mount Sinai Kravis Children's Hospital among the country’s best in several pediatric specialties. The Icahn School of Medicine at Mount Sinai is one of three medical schools that have earned distinction by multiple indicators: It is consistently ranked in the top 20 by U.S. News & World Report's "Best Medical Schools," aligned with a U.S. News & World Report "Honor Roll" Hospital, and top 20 in the nation for National Institutes of Health funding and top 5 in the nation for numerous basic and clinical research areas. Newsweek’s “The World’s Best Smart Hospitals” ranks The Mount Sinai Hospital as No. 1 in New York and in the top five globally, and Mount Sinai Morningside in the top 20 globally.

For more information, visit https://www.mountsinai.org or find Mount Sinai on FacebookTwitter and YouTube.